This article reflects theoretical addressed the notion of innovation and system innovation. Innovations arise as a result of the innovation process, which is the basis for the creation of innovation. The innovation process can be represented as all changes scientific, technological and organizational dissemination and implementation of innovations and innovation processes defines all technical and scientific progress. Methodological issues, now is very important and essential to create a complete, flexible and dynamic innovation, able to solve the problem of changing the technology base of the company. From this aspect, the method of systematic approach becomes appropriate, perhaps even crucial in terms of theory and practice.