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SM ISO690:2012 ROGOJIN, Vladimir. On computational properties of gene assembly
in ciliates. In: Computer Science Journal of Moldova, 2010, nr. 2(53), pp. 171-209. ISSN 1561-4042. |
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Computer Science Journal of Moldova | ||||||
Numărul 2(53) / 2010 / ISSN 1561-4042 /ISSNe 2587-4330 | ||||||
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CZU: 004.8:519.756.2:577.212 | ||||||
Pag. 171-209 | ||||||
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Rezumat | ||||||
Gene assembly in stichotrichous ciliates happening during
sexual reproduction is one of the most involved DNA manipulation processes occurring in biology. This biological process is of
high interest from the computational and mathematical points of
view due to its close analogy with such concepts and notions in
theoretical computer science as permutation and linked list sorting and string rewriting. Studies on computational properties
of gene assembly in ciliates represent a good example of interdisciplinary research contributing to both computer science and
biology. We review here a number of general results related both
to the development of different computational methods enhancing our understanding on the nature of gene assembly, as well as
to the development of new biologically motivated computational
and mathematical models and paradigms. Those paradigms contribute in particular to combinatorics, formal languages and computability theories. |
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