Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance
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MUNK, Patrick, BRINCH, Christian, MOLLER, Frederik Duus, NOI, Autori, COJOCARU, Radu, BURDUNIUC (POPA), Olga. Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance. In: Nature Communications, 2022, vol. 13, p. 0. ISSN 2041-1723. DOI: https://doi.org/10.1038/s41467-022-34312-7
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Nature Communications
Volumul 13 / 2022 / ISSN 2041-1723

Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance

DOI:https://doi.org/10.1038/s41467-022-34312-7

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Munk Patrick1, Brinch Christian1, Moller Frederik Duus1, Noi Autori, Cojocaru Radu2, Burduniuc (Popa) Olga3
 
1 Technical University of Denmark,
2 ”Nicolae Testemițanu” State University of Medicine and Pharmacy,
3 National Agency for Public Health
 
 
Disponibil în IBN: 27 ianuarie 2023


Rezumat

Antimicrobial resistance (AMR) is a major threat to global health. Understanding the emergence, evolution, and transmission of individual antibiotic resistance genes (ARGs) is essential to develop sustainable strategies combatting this threat. Here, we use metagenomic sequencing to analyse ARGs in 757 sewage samples from 243 cities in 101 countries, collected from 2016 to 2019. We find regional patterns in resistomes, and these differ between subsets corresponding to drug classes and are partly driven by taxonomic variation. The genetic environments of 49 common ARGs are highly diverse, with most common ARGs carried by multiple distinct genomic contexts globally and sometimes on plasmids. Analysis of flanking sequence revealed ARG-specific patterns of dispersal limitation and global transmission. Our data furthermore suggest certain geographies are more prone to transmission events and should receive additional attention. 

Cuvinte-cheie
Anti-Bacterial Agents, drug resistance, Bacterial, Genomics, Metagenome, sewage